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Article

Gong, Q., Wang, Y., He, L., Huang, F., Zhang, D., Wang, Y., Wei, X., Han, M., Deng, H., Luo, L., Cui, F., Hong, Yiguo and Liu, Y. (2023) Molecular basis of methyl-salicylate-mediated plant airborne defence. Nature, 622. pp. 139-148. ISSN Print: 0028-0836 Online: 1476-4687

Erdogan, Ibrahim, Cevher-Keskin, B., Bilir, Ozlem, Hong, Yiguo and Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048 (2023) Recent Developments in CRISPR/Cas9 Genome-Editing Technology Related to Plant Disease Resistance and Abiotic Stress Tolerance. Biology, 12 (7). p. 1037. ISSN 2079-7737

Pei, Y., Xue, Q., Zhang, Z., Shu, P., Deng, H., Bouzayen, M., Hong, Yiguo and Liu, M. (2023) β-1,3-GLUCANASE10 regulates tomato development and disease resistance by modulating callose deposition. Plant Physiology, 192 (4). pp. 2785-2802. ISSN Print: 0032-0889 Electronic: 1532-2548

Shu, P., Zhang, Z., Wu, Y., Chen, Y., Li, K., Deng, H., Zhang, J., Zhang, X., Wang, J., Liu, Z., Xie, Y., Du, K., Li, M., Bouzayen, M., Hong, Yiguo, Zhang, Y. and Liu, M. (2023) A comprehensive metabolic map reveals major quality regulations in red-flesh kiwifruit (Actinidia chinensis). New Phytologist. ISSN 1469-8137

Ma, W., Zhang, P., Zhao, J. and Hong, Yiguo (2023) Chinese cabbage: an emerging model for functional genomics in leafy vegetable crops. Trends in Plant Science, 28 (5). pp. 515-518. ISSN 1878-4372 (online)

Wang, Yan, Li, Jinlin, Wang, Jingran, Han, Ping, Miao, Shulei, Zheng, Xiyin, Han, Meng, Shen, Xueqi, Li, Huangai, Wu, Ming, Hong, Yiguo and Liu, Yule ORCID: https://orcid.org/0000-0002-4423-6045 (2022) Plant UVRAG interacts with ATG14 to regulate autophagosome maturation and geminivirus infection. New Phytologist, 236 (4). pp. 1358-1374. ISSN 1469-8137

Gong, Q., Wang, Y., Jin, Zhenhui, Hong, Yiguo and Liu, Y. (2022) Transcriptional and post-transcriptional regulation of RNAi-related gene expression during plant-virus interactions. Stress Biology, 2 (33). ISSN 2731-0450

Bilir, Ö., Göl, Deniz, Hong, Yiguo, McDowell, J. M. and Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048 (2022) Small RNA-based plant protection against diseases. Frontiers in Plant Science, 13 (951097). ISSN 1664-462X

Jimenez-Quiros, Catherine, Okechukwu, Emeka C., Hong, Yiguo, Baysal, Ömür and Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048 (2022) Comparison of Antifungal Activity of Bacillus Strains against Fusarium graminearum In Vitro and In Planta. Plants, 11 (15). p. 1999. ISSN EISSN 2223-7747

Mohamed, A., Jin, Zhenhui, Osman, T., Shi, N., Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048, Jackson, S. and Hong, Yiguo (2022) Hotspot siRNA Confers Plant Resistance against Viral Infection. Biology, 11 (5). p. 714. ISSN 2079-7737

Wang, Y., Gong, Q., Jin, Zhenhui, Liu, Y. and Hong, Yiguo (2022) Linking calcium and RNAi signaling in plants. Trends in Plant Science, 27 (4). P328-330. ISSN 1878-4372 (online)

Yu, Z., Wang, Y., Mei, F., Yan, H., Jin, Zhenhui, Zhang, Pengcheng, Zhang, X., Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048, Jackson, S., Shi, N. and Hong, Yiguo (2022) Spinach-based RNA mimicking GFP in plant cells. Functional & Integrative Genomics. ISSN Online: 1438-7948

Yu, Z., Chen, W., Wang, Y., Zhang, P., Shi, N. and Hong, Yiguo (2022) Mobile Flowering Locus T RNA – Biological Relevance and Biotechnological Potential. Frontiers in Plant Science, 12 (792192). ISSN 1664-462X

Kahveci, E., Devran, Z., Özkaynak, E., Hong, Yiguo, Studholme, D.J. and Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048 (2021) Genomic-Assisted Marker Development Suitable for CsCvy-1 Selection in Cucumber Breeding. Frontiers in Plant Science, 12 (691576). ISSN 1664-462X

Wang, Y., Gong, Q., Wu, Y., Huang, F., Ismayil, A., Zhang, D., Li, H., Gu, H., Ludman, M., Fátyol, K., Qi, Y., Yoshioka, K., Hanley-Bowdoin, L., Hong, Yiguo and Liu, Y. (2021) A calmodulin-binding transcription factor links calcium signaling to antiviral RNAi defense in plants. Cell Host & Microbe. ISSN 1931-3128

Yao, M., Chen, W., Kong, J., Zhang, X., Shi, N., Zhong, S., Ma, P., Gallusci, P., Jackson, S., Liu, Y. and Hong, Yiguo (2020) METHYLTRANSFERASE1 and Ripening Modulate Vivipary during Tomato Fruit Development. Plant Physiology, 183 (4). pp. 1883-1897. ISSN Print 0032-0889 Online 1532-2548

Zhang, X., Kang, L., Zhang, Q., Meng, Q., Pan, Y., Yu, Z., Shi, N., Jackson, S., Zhang, X., Wang, H., Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048 and Hong, Yiguo (2020) An RNAi suppressor activates in planta virus–mediated gene editing. Functional & Integrative Genomics, 20. pp. 471-477. ISSN Print: 1438-793X Online: 1438-7948

Yuan, C., Li, H., Qin, C., Zhang, X., Chen, Q., Zhang, P., Xu, X., He, M., Zhang, X., Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048, Xue, D., Wang, H., Jackson, S., He, Y., Shi, N. and Hong, Yiguo (2020) Foxtail Mosaic Virus-induced Flowering Assays in Monocot Crops. Journal of Experimental Botany, 71 (10). pp. 3012-3023. ISSN Online ISSN 1460-2431 - Print ISSN 0022-0957

Lai, T., Wang, X., Ye, B., Jin, M., Chen, W., Wang, Y., Zhou, Y., Blank, A.M., Gu, M., Zhang, P., Zhang, X., Li, C., Wang, H., Liu, Y., Gallusci, P., Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048 and Hong, Yiguo (2020) Molecular and functional characterization of SISPL-CNR in tomato fruit ripening and cell death. Journal of Experimental Botany, 71 (10). pp. 2995-3011. ISSN Online ISSN 1460-2431 - Print ISSN 0022-0957

Bilir, Ozlem, Telli, Osman, Norman, Chris, Budak, H., Hong, Yiguo and Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048 (2019) Small RNA Inhibits Infection by Downy Mildew Pathogen Hyaloperonospora Arabidopsidis. Molecular Plant Pathology, 20 (11). pp. 1523-1534. ISSN Online: 1364-3703

Wang, Y., Wu, Y., Gong, Q., Ismayil, A., Yuan, Y., Lian, B., Jia, Q., Han, M., Deng, H., Hong, Yiguo, Hanley-Bowdoin, L., Qi, Y. and Liu, Y. (2019) Geminiviral V2 Protein Suppresses Transcriptional Gene Silencing through Interaction with AGO4. Journal of Virology, 93 (6). e01675-18. ISSN Print: 0022-538X Online: 1098-5514

Zhang, X., Lai, T., Zhang, P., Zhang, X., Yuan, C., Jin, Z., Li, H., Yu, Z., Qin, C., Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048, Ma, P., Cheng, Q. and Hong, Yiguo (2019) Mini Review: Revisiting Mobile RNA Silencing in Plants. Plant Science, 278. pp. 113-117. ISSN 0168-9452

Ismayil, A., Haxim, Y., Wang, Y., Li, H., Qian, L., Han, T., Chen, T., Jia, Q., Yihao Liu, A., Zhu, S., Deng, H., Gorovits, R., Hong, Yiguo, Hanley-Bowdoin, L. and Liu, Y. (2018) Cotton Leaf Curl Multan Virus C4 Protein Suppresses Both Transcriptional and Post-transcriptional Gene Silencing by Interacting with SAM Synthetase. PLOS Pathogens, 14 (8). e1007282.

Devran, Z., Kahveci, E., Hong, Yiguo, Studholme, D.J. and Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048 (2018) Identifying Molecular Markers Suitable For Frl Selection in Tomato Breeding. Theoretical and Applied Genetics, 131 (10). pp. 2099-2105. ISSN 0040-5752 Online: 1432-2242

Chen, W., Yu, Z., Kong, J., Wang, H., Li, Y., Zhao, M., Wang, X., Zheng, Q., Shi, N., Zhang, P., Zhong, S., Hunter, P., Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048 and Hong, Yiguo (2018) Comparative WGBS Identifies Genes that Influence Non-ripe Phenotype in Tomato Epimutant Colourless Non-ripening. Science China Life Sciences, 61 (2). pp. 244-252. ISSN 1674-7305 Online: 1869-1889

Chen, W., Zhang, X., Fan, Y., Li, B., Ryabov, E., Shi, N., Zhao, M., Yu, Z., Qin, C., Zheng, Q., Zhang, P., Wang, H., Jackson, S., Cheng, Q., Liu, Y., Gallusci, P. and Hong, Yiguo (2018) A Genetic Network for Systemic RNA Silencing in Plants. Plant Physiology, 176 (4). pp. 2700-2719. ISSN 0032-0889 Online 1532-2548

Yu, Z., Chen, Q., Chen, W., Zhang, X., Mei, F., Zhang, P., Zhao, M., Wang, X., Shi, N., Jackson, S. and Hong, Yiguo (2017) Multigene Editing Via CRISPR/Cas9 Guided By a Single-sgRNA Seed in Arabidopsis. Journal of Integrative Plant Biology. ISSN 1672-9072 Online: 1744-7909

Qin, C., Li, B., Fan, Y., Zhang, X., Yu, Z., Ryabov, E., Zhao, M., Wang, H., Shi, N., Zhang, P., Jackson, S., Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048, Cheng, Q., Liu, Y., Gallusci, P. and Hong, Yiguo (2017) Roles of Dicer-Like Proteins 2 and 4 in Intra- and Intercellular Antiviral Silencing. Plant Physiology, 174 (2). pp. 1067-1081. ISSN Print 0032-0889 Online 1532-2548

Qin, C., Chen, W., Shen, J., Cheng, L., Akande, F., Zhang, K., Yuan, C., Li, C., Zhang, P., Shi, N., Cheng, Q., Liu, Y., Jackson, S. and Hong, Yiguo (2017) A Virus-induced Assay for Functional Dissection and Analysis of Monocot and Dicot Flowering Time Genes. Plant Physiology, 174 (2). pp. 875-885. ISSN 0032-0889 Online 1532-2548

Book Section

Yu, Z., Cho, S.K., Zhang, P., Hong, Yiguo and Hannapel, D.J. (2020) Utilizing Potato Virus X to Monitor RNA Movement. In: RNA Tagging. Methods in Molecular Biology. Methods in Molecular Biology, 2166 (2166). Humana, New York, pp. 181-194. ISBN 9781071607114 (print) 9781-071607121 (online)

Conference or Workshop Item

Tör, M. ORCID: https://orcid.org/0000-0002-4416-5048, Bilir, Ozlem, Telli, Osman, John, Simon, Norman, Chris, Budak, H. and Hong, Yiguo (2019) Silencing Genes in Arabidopsis Downy Mildew Using Exogenously Applied Small RNAs. In: IS-MPMI XVIII Congress Annual Meeting, 14th - 16th July 2019, Glasgow, Scotland. (Unpublished)

Book

Poltronieri, P. and Hong, Yiguo (2019) Applied Plant Biotechnology for Improving Resistance to Biotic Stress (1st Edition). Academic Press, Cambridge, Massachusetts. ISBN Paperback: 9780128160305 eBook: 9780128160312

Poltronieri, P. and Hong, Yiguo (2015) Applied Plant Genomics and Biotechnology (1st Edition). Woodhead Publishing Series in Biomedicine . Woodhead Publishing (Elsevier), Sawston, Cambridge. ISBN eBook: 9780081000717 Hardcover: 9780081000687